This vignette shows you how to create your own S3 vector classes. It focuses on the aspects of making a vector class that every class needs to worry about; you’ll also need to provide methods that actually make the vector useful.
I assume that you’re already familiar with the basic machinery of S3, and the vocabulary I use in Advanced R: constructor, helper, and validator. If not, I recommend reading at least the first two sections of the S3 chapter of Advanced R.
library(vctrs)
This vignette works through five big topics:
They’re collectively demonstrated with a number of simple S3 classes:
Percent: a double vector that prints as a percentage. This illustrates the basic mechanics of class creation, coercion, and casting.
Decimal: a double vector that always prints with a fixed number of decimal places. This class has an attribute which needs a little extra care in casts and coercions.
Cached sum: a double vector that caches the total sum in an attribute. The attribute depends on the data, so needs extra care.
Rational: a pair of integer vectors that defines a rational number like 2 / 3
. This introduces you to the record style, and to the equality and comparison operators. It also needs special handling for +
, -
, and friends.
Polynomial: a list of integer vectors that define polynomials like 1 + x - x^3
. Sorting such vectors correctly requires a custom equality method.
Meter: a numeric vector with meter units. This is the simplest possible class with interesting algebraic properties.
Period and frequency: a pair of classes represent a period, or it’s inverse, frequency. This allows us to explore more arithmetic operators.
In this section you’ll learn how to create a new vctrs class by calling new_vctr()
. This creates an object with class vctrs_vctr
which has a number of methods. These are designed to make your life as easy as possible. For example:
The print()
and str()
methods are defined in terms of format()
so you get a pleasant, consistent display as soon as you’ve made your format()
method.
You can immediately put your new vector class in a data frame because as.data.frame.vctrs_vctr()
does the right thing.
Subsetting ([
, [[
, and $
), length<-
, and rep()
methods automatically preserve attributes because they use vec_restore()
. A default vec_restore()
works for all classes where the attributes are data-independent, and can easily be customised when the attributes do depend on the data.
Default subset-assignment methods ([<-
, [[<-
, and $<-
) follow the principle that the new values should be coerced to match the existing vector. This gives predictable behaviour and clear error messages.
In this section, I’ll show you how to make a percent
class, i.e., a double vector that is printed as a percentage. We start by defining a low-level constructor that uses vec_assert()
to checks types and/or sizes then calls new_vctr()
.
percent
is built on a double vector of any length and doesn’t have any attributes.
new_percent <- function(x = double()) {
vec_assert(x, double())
new_vctr(x, class = "vctrs_percent")
}
x <- new_percent(c(seq(0, 1, length = 4), NA))
x
#> <vctrs_percent[5]>
#> [1] 0.0000000 0.3333333 0.6666667 1.0000000 NA
str(x)
#> vctrs_pr [1:5] 0.0000000, 0.3333333, 0.6666667, 1.0000000, NA
Note that we prefix the name of the class with the name of the package. This prevents conflicting definitions between packages. For packages that implement only one class (such as blob), it’s fine to use the package name without prefix as the class name.
We then follow up with a user friendly helper. Here we’ll use vec_cast()
to allow it to accept anything coercible to a double:
percent <- function(x = double()) {
x <- vec_cast(x, double())
new_percent(x)
}
Before you go on, check that user-friendly constructor returns a zero-length vector when called with no arguments. This makes it easy to use as a prototype.
Add a call to setOldClass()
for compatibility with the S4 system:
#' @importFrom methods setOldClass
methods::setOldClass(c("vctrs_percent", "vctrs_vctr"))
For the convenience of your users, consider implementing an is_percent()
function:
is_percent <- function(x) {
inherits(x, "vctrs_percent")
}
format()
methodThe first method for every class should almost always be a format()
method. This should return a character vector the same length as x
. The easiest way to do this is to rely on one of R’s low-level formatting functions like formatC()
:
format.vctrs_percent <- function(x, ...) {
out <- formatC(signif(vec_data(x) * 100, 3))
out[is.na(x)] <- NA
out[!is.na(x)] <- paste0(out[!is.na(x)], "%")
out
}
(Note the use of vec_data()
so format()
doesn’t get stuck in an infinite loop, and that I take a little care to not convert NA
to "NA"
; this leads to better printing.)
The format method is also used by data frames, tibbles, and str()
:
For optimal display, I recommend also defining an abbreviated type name, which should be 4-5 letters for commonly used vectors. This is used in tibbles and in str()
:
vec_ptype_abbr.vctrs_percent <- function(x, ...) {
"prcnt"
}
tibble::tibble(x)
#> # A tibble: 5 x 1
#> x
#> <prcnt>
#> 1 0%
#> 2 33.3%
#> 3 66.7%
#> 4 100%
#> 5 NA
str(x)
#> prcnt [1:5] 0%, 33.3%, 66.7%, 100%, <NA>
If you need more control over printing in tibbles, implement a method for pillar::pillar_shaft()
. See https://tibble.tidyverse.org/articles/extending.html for details.
The next set of methods you are likely to need are those related to coercion and casting. Coercion and casting are two sides of the same coin: changing the prototype of an existing object. When the change happens implicitly (e.g in c()
) we call it coercion; when the change happens explicitly (e.g. with as.integer(x)
), we call it casting.
One of the main goals of vctrs is to put coercion and casting on a robust theoretical footing so it’s possible to make accurate predictions about what (e.g.) c(x, y)
should do when x
and y
have different prototypes. vctrs achieves this goal through two generics:
vec_ptype2(x, y)
defines possible set of coercions. It returns a prototype if x
and y
can be safely coerced to the same prototype; otherwise it returns an error. The set of automatic coercions is usually quite small because too many tend to make code harder to reason about and silently propagate mistakes.
vec_cast(x, to)
defines the possible sets of casts. It returns x
translated to have prototype to
, or throws an error if the conversion isn’t possible. The set of possible casts is a superset of possible coercions because they’re requested explicitly.
Both generics use double dispatch which means that the implementation is selected based on the class of two arguments, not just one. S3 does not natively support double dispatch, but we can implement with a trick: doing single dispatch twice. In practice, this means you end up with method names with two classes, like vec_ptype2.foo.bar()
, and you need a little boilerplate to get started. The key idea that makes double dispatch work without any modifications to S3 is that a function (like vec_ptype2.foo()
) can be both an S3 generic and an S3 method.
vec_ptype2.MYCLASS <- function(x, y, ...) UseMethod("vec_ptype2.MYCLASS", y)
vec_ptype2.MYCLASS.default <- function(x, y, ..., x_arg = "x", y_arg = "y") {
vec_default_ptype2(x, y, x_arg = x_arg, y_arg = y_arg)
}
vec_cast.MYCLASS <- function(x, to, ...) UseMethod("vec_cast.MYCLASS")
vec_cast.MYCLASS.default <- function(x, to, ...) vec_default_cast(x, to)
We’ll discuss what this boilerplate does in the upcoming sections; just remember you’ll always need to copy and paste it when creating a new S3 class.
We’ll make our percent class coercible back and forth with double vectors. I’ll start with the boilerplate for vec_ptype2()
:
vec_ptype2.vctrs_percent <- function(x, y, ...) UseMethod("vec_ptype2.vctrs_percent", y)
vec_ptype2.vctrs_percent.default <- function(x, y, ..., x_arg = "x", y_arg = "y") {
vec_default_ptype2(x, y, x_arg = x_arg, y_arg = y_arg)
}
The default method provides a user friendly error message if the coercion doesn’t exist and makes sure NA
is handled in a standard way. NA
is technically a logical vector, but we want to stand in for a missing value of any type.
vec_ptype2("bogus", percent())
#> No common type for `x` <character> and `y` <vctrs_percent>.
vec_ptype2(percent(), NA)
#> <vctrs_percent[0]>
vec_ptype2(NA, percent())
#> <vctrs_percent[0]>
Next, start by saying that a vctrs_percent
combined with a vctrs_percent
yields a vctrs_percent
, which we indicate by returning a prototype generated by the constructor.
Next we define methods that say that combining a percent
and double should yield a double
. We avoid returning a percent
here because errors in the scale (1 vs. 0.01) are more obvious with raw numbers.
Because double dispatch is a bit of a hack, we need to provide two methods. It’s your responsibility to ensure that each pair return the same result: if they don’t you will get weird and unpredictable behaviour.
vec_ptype2.vctrs_percent.double <- function(x, y, ...) double()
vec_ptype2.double.vctrs_percent <- function(x, y, ...) double()
We can check that we’ve implemented this correctly with vec_ptype_show()
:
vec_ptype_show(percent(), double(), percent())
#> Prototype: <double>
#> 0. ( , <vctrs_percent> ) = <vctrs_percent>
#> 1. ( <vctrs_percent> , <double> ) = <double>
#> 2. ( <double> , <vctrs_percent> ) = <double>
Next we implement explicit casting, again starting with the boilerplate:
vec_cast.vctrs_percent <- function(x, to, ...) UseMethod("vec_cast.vctrs_percent")
vec_cast.vctrs_percent.default <- function(x, to, ...) vec_default_cast(x, to)
Then providing a method to coerce a percent to a percent:
And then for converting back and forth between doubles. To convert a double to a percent we use the percent()
helper (not the constructor; this is unvalidated user input). To convert a percent
to a double, we strip the attributes.
vec_cast.vctrs_percent.double <- function(x, to, ...) percent(x)
vec_cast.double.vctrs_percent <- function(x, to, ...) vec_data(x)
Then we can check this works with vec_cast()
:
vec_cast(0.5, percent())
#> <vctrs_percent[1]>
#> [1] 50%
vec_cast(percent(0.5), double())
#> [1] 0.5
Once you’ve implemented vec_ptype2()
and vec_cast()
you get vec_c()
, [<-
, and [[<-
implementations for free.
vec_c(percent(0.5), 1)
#> [1] 0.5 1.0
vec_c(NA, percent(0.5))
#> <vctrs_percent[2]>
#> [1] <NA> 50%
# but
vec_c(TRUE, percent(0.5))
#> No common type for `..1` <logical> and `..2` <vctrs_percent>.
x <- percent(c(0.5, 1, 2))
x[1:2] <- 2:1
#> No common type for `x` <integer> and `value` <vctrs_percent>.
x[[3]] <- 0.5
x
#> <vctrs_percent[3]>
#> [1] 50% 100% 50%
You’ll also get mostly correct behaviour for c()
. The exception is when you use c()
with a base R class:
# Correct
c(percent(0.5), 1)
#> [1] 0.5 1.0
c(percent(0.5), factor(1))
#> No common type for `..1` <vctrs_percent> and `..2` <factor<5b58e>>.
# Incorrect
c(factor(1), percent(0.5))
#> [1] 1.0 0.5
Unfortunately there’s no way to fix this problem with the current design of c()
.
Again, as a convenience, consider providing an as_percent()
function that makes use of the casts defined in your vec_cast.vctrs_percent()
methods:
as_percent <- function(x) {
vec_cast(x, new_percent())
}
Now that you’ve seen the basics with a very simple S3 class, we’ll gradually explore more complicated scenarios. This section creates a decimal
class that prints with the specified number of decimal places. This is very similar to percent
but now the class needs an attribute: the number of decimal places to display (an integer vector of length 1).
We start of as before, defining a low-level constructor, a user-friendly constructor, a format()
method, and a vec_ptype_abbr()
. Note that additional object attributes are simply passed along to new_vctr()
:
new_decimal <- function(x = double(), digits = 2L) {
vec_assert(x, ptype = double())
vec_assert(digits, ptype = integer(), size = 1)
new_vctr(x, digits = digits, class = "vctrs_decimal")
}
decimal <- function(x = double(), digits = 2L) {
x <- vec_cast(x, double())
digits <- vec_recycle(vec_cast(digits, integer()), 1L)
new_decimal(x, digits = digits)
}
digits <- function(x) attr(x, "digits")
format.vctrs_decimal <- function(x, ...) {
sprintf(paste0("%-0.", digits(x), "f"), x)
}
vec_ptype_abbr.vctrs_decimal <- function(x, ...) {
paste0("dec")
}
x <- decimal(runif(10), 1L)
x
#> <vctrs_decimal[10]>
#> [1] 0.1 0.8 0.6 0.2 0.0 0.5 0.5 0.3 0.7 0.8
Note that I provide a little helper to extract the digits
attribute. This makes the code a little easier to read and should not be exported.
By default, vctrs assumes that attributes are independent of the data and so are automatically preserved. You’ll see what to do if the attributes are data dependent in the next section.
For the sake of exposition, we’ll assume that digits
is an important attribute of the class and should be included in the full type:
vec_ptype_full.vctrs_decimal <- function(x, ...) {
paste0("decimal<", digits(x), ">")
}
x
#> <decimal<1>[10]>
#> [1] 0.1 0.8 0.6 0.2 0.0 0.5 0.5 0.3 0.7 0.8
Now consider vec_cast()
and vec_ptype2()
. I start with the standard recipes:
vec_ptype2.vctrs_decimal <- function(x, y, ...) UseMethod("vec_ptype2.vctrs_decimal")
vec_ptype2.vctrs_decimal.default <- function(x, y, ..., x_arg = "x", y_arg = "y") {
vec_default_ptype2(x, y, x_arg = x_arg, y_arg = y_arg)
}
vec_cast.vctrs_decimal <- function(x, to, ...) UseMethod("vec_cast.vctrs_decimal")
vec_cast.vctrs_decimal.default <- function(x, to, ...) vec_default_cast(x, to)
Casting and coercing from one decimal to another requires a little thought as the values of the digits
attribute might be different, and we need some way to reconcile them. Here I’ve decided to chose the maximum of the two; other reasonable options are to take the value from the left-hand side or throw an error.
vec_ptype2.vctrs_decimal.vctrs_decimal <- function(x, y, ...) {
new_decimal(digits = max(digits(x), digits(y)))
}
vec_cast.vctrs_decimal.vctrs_decimal <- function(x, to, ...) {
new_decimal(vec_data(x), digits = digits(to))
}
vec_c(decimal(1/100, digits = 3), decimal(2/100, digits = 2))
#> <decimal<3>[2]>
#> [1] 0.010 0.020
Finally, I can implement coercion to and from other types, like doubles. When automatically coercing, I choose the richer type (i.e., the decimal).
vec_ptype2.vctrs_decimal.double <- function(x, y, ...) x
vec_ptype2.double.vctrs_decimal <- function(x, y, ...) y
vec_cast.vctrs_decimal.double <- function(x, to, ...) new_decimal(x, digits = digits(to))
vec_cast.double.vctrs_decimal <- function(x, to, ...) vec_data(x)
vec_c(decimal(1, digits = 1), pi)
#> <decimal<1>[2]>
#> [1] 1.0 3.1
vec_c(pi, decimal(1, digits = 1))
#> <decimal<1>[2]>
#> [1] 3.1 1.0
If type x
has greater resolution than y
, there will be some inputs that lose precision. These should generate errors using stop_lossy_cast()
. You can see that in action when casting from doubles to integers; only some doubles can become integers without losing resolution.
vec_cast(c(1, 2, 10), to = integer())
#> [1] 1 2 10
vec_cast(c(1.5, 2, 10.5), to = integer())
#> Lossy cast from `x` <double> to `to` <integer>.
#> Locations: 1, 3
The next level up in complexity is an object that has data-dependent attributes. To explore this idea we’ll create a vector that caches the sum of its values. As usual, we start with low-level and user-friendly constructors:
new_cached_sum <- function(x = double(), sum = 0L) {
vec_assert(x, ptype = double())
vec_assert(sum, ptype = double(), size = 1L)
new_vctr(x, sum = sum, class = "vctrs_cached_sum")
}
cached_sum <- function(x) {
x <- vec_cast(x, double())
new_cached_sum(x, sum(x))
}
For this class, we can use the default format()
method, and instead, we’ll customise the obj_print_footer()
method. This is a good place to display user facing attributes.
obj_print_footer.vctrs_cached_sum <- function(x, ...) {
cat("# Sum: ", format(attr(x, "sum"), digits = 3), "\n", sep = "")
}
x <- cached_sum(runif(10))
x
#> <vctrs_cached_sum[10]>
#> [1] 0.87460066 0.17494063 0.03424133 0.32038573 0.40232824 0.19566983
#> [7] 0.40353812 0.06366146 0.38870131 0.97554784
#> # Sum: 3.83
We’ll also override sum()
and mean()
to use the attribute. This is easiest to do with vec_math()
, which you’ll learn about later.
vec_math.vctrs_cached_sum <- function(.fn, .x, ...) {
cat("Using cache\n")
switch(.fn,
sum = attr(.x, "sum"),
mean = attr(.x, "sum") / length(.x),
vec_math_base(.fn, .x, ...)
)
}
sum(x)
#> Using cache
#> [1] 3.833615
As mentioned above, vctrs assumes that attributes are independent of the data. This means that when we take advantage of the default methods, they’ll work, but return the incorrect result:
To fix this, you need to provide a vec_restore()
method. Note that this method dispatches on the to
argument.
vec_restore.vctrs_cached_sum <- function(x, to, ..., i = NULL) {
new_cached_sum(x, sum(x))
}
x[1]
#> <vctrs_cached_sum[1]>
#> [1] 0.8746007
#> # Sum: 0.875
This works because most of the vctrs methods dispatch to the underlying base function by first stripping off extra attributes with vec_data()
and then reapplying them again with vec_restore()
. The default vec_restore()
method copies over all attributes, which is not appropriate when the attributes depend on the data.
Note that vec_restore.class
is subtly different from vec_cast.class.class()
. vec_restore()
is used when restoring attributes that have been lost; vec_cast()
is used for coercions. This is easier to understand with a concrete example. Imagine factors were implemented with new_vctr()
. vec_restore.factor()
would restore attributes back to an integer vector, but you would not want to allow manually casting an integer to a factor with vec_cast()
.
Record-style objects use a list of equal-length vectors to represent individual components of the object. The best example of this is POSIXlt
, which underneath the hood is a list of 11 fields like year, month, and day. Record-style classes override length()
and subsetting methods to conceal this implementation detail.
x <- as.POSIXlt(ISOdatetime(2020, 1, 1, 0, 0, 1:3))
x
#> [1] "2020-01-01 00:00:01 UTC" "2020-01-01 00:00:02 UTC"
#> [3] "2020-01-01 00:00:03 UTC"
length(x)
#> [1] 3
length(unclass(x))
#> [1] 9
x[[1]] # the first date time
#> [1] "2020-01-01 00:00:01 UTC"
unclass(x)[[1]] # the first component, the number of seconds
#> [1] 1 2 3
vctrs makes it easy to create new record-style classes using new_rcrd()
, which has a wide selection of default methods.
A fraction, or rational number, can be represented by a pair of integer vectors representing the numerator (the number on top) and the denominator (the number on bottom), where the length of each vector must be the same. To represent such a data structure we turn to a new base data type: the record (or rcrd for short).
As usual we start with low-level and user-friendly constructors. The low-level constructor calls new_rcrd()
, which needs a named list of equal-length vectors.
new_rational <- function(n = integer(), d = integer()) {
vec_assert(n, ptype = integer())
vec_assert(d, ptype = integer())
new_rcrd(list(n = n, d = d), class = "vctrs_rational")
}
Our user friendly constructor casts n
and d
to integers and recycles them to the same length.
rational <- function(n, d) {
c(n, d) %<-% vec_cast_common(n, d, .to = integer())
c(n, d) %<-% vec_recycle_common(n, d)
new_rational(n, d)
}
x <- rational(1, 1:10)
Behind the scenes, x
is a named list with two elements. But those details are hidden so that it behaves like a vector:
To access the underlying fields we need to use field()
and fields()
:
fields(x)
#> [1] "n" "d"
field(x, "n")
#> [1] 1 1 1 1 1 1 1 1 1 1
This allows us to create a format method:
format.vctrs_rational <- function(x, ...) {
n <- field(x, "n")
d <- field(x, "d")
out <- paste0(n, "/", d)
out[is.na(n) | is.na(d)] <- NA
out
}
vec_ptype_abbr.vctrs_rational <- function(x, ...) "rtnl"
vec_ptype_full.vctrs_rational <- function(x, ...) "rational"
x
#> <rational[10]>
#> [1] 1/1 1/2 1/3 1/4 1/5 1/6 1/7 1/8 1/9 1/10
vctrs uses the format()
method in str()
, hiding the underlying implementation details from the user:
For rational
, vec_ptype2()
and vec_cast()
follow the same pattern as percent()
. I allow coercion from integer and to doubles.
vec_ptype2.vctrs_rational <- function(x, y, ...) UseMethod("vec_ptype2.vctrs_rational", y)
vec_ptype2.vctrs_rational.default <- function(x, y, ..., x_arg = "x", y_arg = "y") {
vec_default_ptype2(x, y, x_arg = x_arg, y_arg = y_arg)
}
vec_ptype2.vctrs_rational.vctrs_rational <- function(x, y, ...) new_rational()
vec_ptype2.vctrs_rational.integer <- function(x, y, ...) new_rational()
vec_ptype2.integer.vctrs_rational <- function(x, y, ...) new_rational()
vec_cast.vctrs_rational <- function(x, to, ...) UseMethod("vec_cast.vctrs_rational")
vec_cast.vctrs_rational.default <- function(x, to, ...) vec_default_cast(x, to)
vec_cast.vctrs_rational.vctrs_rational <- function(x, to, ...) x
vec_cast.double.vctrs_rational <- function(x, to, ...) field(x, "n") / field(x, "d")
vec_cast.vctrs_rational.integer <- function(x, to, ...) rational(x, 1)
vec_c(rational(1, 2), 1L, NA)
#> <rational[3]>
#> [1] 1/2 1/1 <NA>
The previous implementation of decimal
was built on top of doubles. This is a bad idea because decimal vectors are typically used when you care about precise values (i.e., dollars and cents in a bank account), and double values suffer from floating point problems.
A better implementation of a decimal class would be to use pair of integers, one for the value to the left of the decimal point, and the other for the value to the right (divided by a scale
). The following code is a very quick sketch of how you might start creating such a class:
new_decimal2 <- function(l, r, scale = 2L) {
vec_assert(l, ptype = integer())
vec_assert(r, ptype = integer())
vec_assert(scale, ptype = integer(), size = 1L)
new_rcrd(list(l = l, r = r), scale = scale, class = "vctrs_decimal2")
}
decimal2 <- function(l, r, scale = 2L) {
l <- vec_cast(l, integer())
r <- vec_cast(r, integer())
c(l, r) %<-% vec_recycle_common(l, r)
scale <- vec_cast(scale, integer())
# should check that r < 10^scale
new_decimal2(l = l, r = r, scale = scale)
}
format.vctrs_decimal2 <- function(x, ...) {
val <- field(x, "l") + field(x, "r") / 10^attr(x, "scale")
sprintf(paste0("%.0", attr(x, "scale"), "f"), val)
}
decimal2(10, c(0, 5, 99))
#> <vctrs_decimal2[3]>
#> [1] 10.00 10.05 10.99
vctrs provides three “proxy” generics. Two of these let you control how your class determines equality and ordering:
vec_proxy_equal()
returns a data vector suitable for comparison. It underpins ==
, !=
, unique()
, anyDuplicated()
, and is.na()
.
vec_proxy_compare()
specifies how to compare the elements of your vector. This proxy is used in <
, <=
, >=
, >
, min()
, max()
, median()
, quantile()
, and xtfrm()
(used in order()
and sort()
) methods.
By default, vec_proxy_equal()
and vec_proxy_compare()
just call vec_proxy()
.
vec_proxy()
returns the actual data of a vector. This is useful when you store the data in a field of your class. Most of the time, you shouldn’t need to implement vec_proxy()
.You should only implement these proxies when some preprocessing on the data is needed to make elements comparable. In that case, defining these methods will get you a lot of behaviour for relatively little work.
These proxy functions should always return a simple object (either a bare vector or a data frame) that possesses the same properties as your class. This permits efficient implementation of the vctrs internals because it allows dispatch to happen once in R, and then efficient computations can be written in C.
Let’s explore these ideas by with the rational class we started on above. By default, vec_proxy()
converts a record to a data frame, and the default comparison works column by column:
x <- rational(c(1, 2, 1, 2), c(1, 1, 2, 2))
x
#> <rational[4]>
#> [1] 1/1 2/1 1/2 2/2
vec_proxy(x)
#> n d
#> 1 1 1
#> 2 2 1
#> 3 1 2
#> 4 2 2
x == rational(1, 1)
#> [1] TRUE FALSE FALSE FALSE
This makes sense as a default but isn’t correct here because rational(1, 1)
represents the same number as rational(2, 2)
, so they should be equal. We can fix that by implementing a vec_proxy_equal()
method that divides n
and d
by their greatest common divisor:
# Thanks to Matthew Lundberg: https://stackoverflow.com/a/21504113/16632
gcd <- function(x, y) {
r <- x %% y
ifelse(r, gcd(y, r), y)
}
vec_proxy_equal.vctrs_rational <- function(x, ...) {
n <- field(x, "n")
d <- field(x, "d")
gcd <- gcd(n, d)
data.frame(n = n / gcd, d = d / gcd)
}
vec_proxy(x)
#> n d
#> 1 1 1
#> 2 2 1
#> 3 1 2
#> 4 2 2
x == rational(1, 1)
#> [1] TRUE FALSE FALSE TRUE
vec_proxy_equal()
is also used by unique()
:
We now need to fix sort()
similarly, since it currently sorts by n
, then by d
:
The easiest fix is to convert the fraction to a decimal and then sort that:
vec_proxy_compare.vctrs_rational <- function(x, ...) {
field(x, "n") / field(x, "d")
}
sort(x)
#> <rational[4]>
#> [1] 1/2 1/1 2/2 2/1
(We could have used the same approach in vec_proxy_equal()
, but when working with floating point numbers it’s not necessarily true that x == y
implies that d * x == d * y
.)
A related problem occurs if we build our vector on top of a list. The following code defines a polynomial class that represents polynomials (like 1 + 3x - 2x^2
) using a list of integer vectors (like c(1, 3, -2)
). Note the use of new_list_of()
in the constructor.
new_poly <- function(x) {
new_list_of(x, ptype = integer(), class = "vctrs_poly")
}
poly <- function(...) {
x <- list(...)
x <- lapply(x, vec_cast, integer())
new_poly(x)
}
vec_ptype_full.vctrs_poly <- function(x, ...) "polynomial"
vec_ptype_abbr.vctrs_poly <- function(x, ...) "poly"
format.vctrs_poly <- function(x, ...) {
format_one <- function(x) {
if (length(x) == 0) {
return("")
} else if (length(x) == 1) {
format(x)
} else {
suffix <- c(paste0("\u22C5x^", seq(length(x) - 1, 1)), "")
out <- paste0(x, suffix)
out <- out[x != 0L]
paste0(out, collapse = " + ")
}
}
vapply(x, format_one, character(1))
}
obj_print_data.vctrs_poly <- function(x, ...) {
if (length(x) == 0)
return()
print(format(x), quote = FALSE)
}
p <- poly(1, c(1, 0, 1), c(1, 0, 0, 0, 2))
p
#> <polynomial[3]>
#> [1] 1 1⋅x^2 + 1 1⋅x^4 + 2
The resulting objects will inherit from the vctrs_list_of
class, which provides tailored methods for $
, [[
, the corresponding assignment operators, and other methods.
class(p)
#> [1] "vctrs_poly" "vctrs_list_of" "vctrs_vctr"
p[2]
#> <polynomial[1]>
#> [1] 1⋅x^2 + 1
p[[2]]
#> [1] 1 0 1
Equality works out of the box because we can tell if two integer vectors are equal:
p == poly(c(1, 0, 1))
#> [1] FALSE TRUE FALSE
But we can’t order them because lists are not comparable:
So we need to define a vec_proxy_compare()
method:
vec_proxy_compare.vctrs_poly <- function(x, ...) {
x_raw <- vec_data(x)
# First figure out the maximum length
n <- max(vapply(x_raw, length, integer(1)))
# Then expand all vectors to this length by filling in with zeros
full <- lapply(x_raw, function(x) c(rep(0L, n - length(x)), x))
# Then turn into a data frame
as.data.frame(do.call(rbind, full))
}
sort(poly(3, 2, 1))
#> <polynomial[3]>
#> [1] 1 2 3
sort(poly(1, c(1, 0, 0), c(1, 0)))
#> <polynomial[3]>
#> [1] 1 1⋅x^1 1⋅x^2
vctrs also provides two mathematical generics that allow you to define a broad swath of mathematical behaviour at once:
vec_math(fn, x, ...)
specifies the behaviour of mathematical functions like abs()
, sum()
, and mean()
. (See ?vec_math()
for the complete list.)
vec_arith(op, x, y)
specifies the behaviour of the arithmetic operations like +
, -
, and %%
. (See ?vec_arith()
for the complete list.)
Both generics define the behaviour for multiple functions because sum.vctrs_vctr(x)
calls vec_math.vctrs_vctr("sum", x)
, and x + y
calls vec_math.x_class.y_class("+", x, y)
. They’re accompanied by vec_math_base()
and vec_arith_base()
which make it easy to call the underlying base R functions.
vec_arith()
uses double dispatch and needs the following standard boilerplate:
vec_arith.MYCLASS <- function(op, x, y, ...) {
UseMethod("vec_arith.MYCLASS", y)
}
vec_arith.MYCLASS.default <- function(op, x, y, ...) {
stop_incompatible_op(op, x, y)
}
I showed an example of vec_math()
to define sum()
and mean()
methods for cached_sum
. Now let’s talk about exactly how it works. Most vec_math()
functions will have a similar form. You use a switch statement to handle the methods that you care about and fall back to vec_math_base()
for those that you don’t care about.
vec_math.vctrs_cached_sum <- function(.fn, .x, ...) {
switch(.fn,
sum = attr(.x, "sum"),
mean = attr(.x, "sum") / length(.x),
vec_math_base(.fn, .x, ...)
)
}
To explore the infix arithmetic operators exposed by vec_arith()
I’ll create a new class that represents a measurement in meter
s:
new_meter <- function(x) {
stopifnot(is.double(x))
new_vctr(x, class = "vctrs_meter")
}
format.vctrs_meter <- function(x, ...) {
paste0(format(vec_data(x)), " m")
}
meter <- function(x) {
x <- vec_cast(x, double())
new_meter(x)
}
x <- meter(1:10)
x
#> <vctrs_meter[10]>
#> [1] 1 m 2 m 3 m 4 m 5 m 6 m 7 m 8 m 9 m 10 m
Because meter
is built on top of a double vector, basic mathematic operations work:
But we can’t do arithmetic:
x + 1
#> <vctrs_meter> + <double> is not permitted
meter(10) + meter(1)
#> <vctrs_meter> + <vctrs_meter> is not permitted
meter(10) * 3
#> <vctrs_meter> * <double> is not permitted
To allow these infix functions to work, we’ll need to provide vec_arith()
generic. But before we do that, let’s think about what combinations of inputs we should support:
It makes sense to add and subtract meters: that yields another meter. We can divide a meter by another meter (yielding a unitless number), but we can’t multiply meters (because that would yield an area).
For a combination of meter and number multiplication and division by a number are acceptable. Addition and subtraction don’t make much sense as we, strictly speaking, are dealing with objects of different nature.
vec_arith()
is another function that uses double dispatch, so as usual we start with a template.
vec_arith.vctrs_meter <- function(op, x, y, ...) {
UseMethod("vec_arith.vctrs_meter", y)
}
vec_arith.vctrs_meter.default <- function(op, x, y, ...) {
stop_incompatible_op(op, x, y)
}
Then write the method for two meter objects. We use a switch statement to cover the cases we care about and stop_incompatible_op()
to throw an informative error message for everything else.
vec_arith.vctrs_meter.vctrs_meter <- function(op, x, y, ...) {
switch(
op,
"+" = ,
"-" = new_meter(vec_arith_base(op, x, y)),
"/" = vec_arith_base(op, x, y),
stop_incompatible_op(op, x, y)
)
}
meter(10) + meter(1)
#> <vctrs_meter[1]>
#> [1] 11 m
meter(10) - meter(1)
#> <vctrs_meter[1]>
#> [1] 9 m
meter(10) / meter(1)
#> [1] 10
meter(10) * meter(1)
#> <vctrs_meter> * <vctrs_meter> is not permitted
Next we write the pair of methods for arithmetic with a meter and a number. These are almost identical, but while meter(10) / 2
makes sense, 2 / meter(10)
does not (and neither do addition and subtraction).
vec_arith.vctrs_meter.numeric <- function(op, x, y, ...) {
switch(
op,
"/" = ,
"*" = new_meter(vec_arith_base(op, x, y)),
stop_incompatible_op(op, x, y)
)
}
vec_arith.numeric.vctrs_meter <- function(op, x, y, ...) {
switch(
op,
"*" = new_meter(vec_arith_base(op, x, y)),
stop_incompatible_op(op, x, y)
)
}
meter(2) * 10
#> <vctrs_meter[1]>
#> [1] 20 m
10 * meter(2)
#> <vctrs_meter[1]>
#> [1] 20 m
meter(20) / 10
#> <vctrs_meter[1]>
#> [1] 2 m
10 / meter(20)
#> <double> / <vctrs_meter> is not permitted
meter(20) + 10
#> <vctrs_meter> + <double> is not permitted
For completeness, we also need vec_arith.vctrs_meter.MISSING
for the unary +
and -
operators:
NAMESPACE
declarationsDefining S3 methods interactively is fine for iteration and exploration, but if your vector lives in a package, you also need to register the S3 methods by listing them in the NAMESPACE
file. The namespace declarations are a little tricky because (e.g.) vec_cast.vctrs_percent()
is both a generic function (which must be exported with export()
) and an S3 method (which must be registered with S3method()
).
This problem wasn’t considered in the design of roxygen2, so you have to be quite explicit:
#' @method vec_cast vctrs_percent
#' @export
#' @export vec_cast.vctrs_percent
vec_cast.vctrs_percent <- function(x, to, ...) {
}
You also need to register the individual double-dispatch methods. Again, this is harder than it should be because roxygen’s heuristics aren’t quite right. That means you need to describe the @method
explicitly:
Hopefully future versions of roxygen will make these exports less painful.